Protein Bagels With Skyr

Name: Protein Bagels With Skyr
Prep time: 15 min
Cook time: 20 min
Total time: 35 min
Yield: 4 bagels
Ingredients: 2 cups all-purpose flour; 1 cup skyr (or Greek yogurt); 1/2 cup warm water; 1 tablespoon active dry yeast; 1 tablespoon honey; 1 teaspoon salt; 1 tablespoon olive oil; Sesame seeds; Poppy seeds; Everything bagel seasoning

Highlighted under: Fresh Healthy Meals Ideas

I absolutely love making protein bagels with skyr because they’re a perfect way to kickstart my day. Packed with protein and topped with a deliciously creamy skyr, they make for an incredibly satisfying breakfast or snack. I created this bagel recipe after experimenting with various doughs, and what I love is how they come out fluffy yet hearty. Plus, they’re quick to make, which fits perfectly into my busy schedule. These bagels are versatile and can be enjoyed sweet or savory, depending on your mood!

Created by

Cecilia Grant

Last updated on 2026-02-01T16:17:36.149Z

When I first tried making bagels, I thought they would be too difficult. However, I discovered that with a few simple ingredients and my trusty kitchen scale, it turned out to be easier than I expected. On my journey to optimize nutrition, incorporating skyr lent a delightful tanginess that complemented the bagel base perfectly. I’ve found that the key to achieving a great texture is not overworking the dough, allowing it to rise just right.

Serving these protein-packed bagels with fresh herbs or a drizzle of honey has become a favorite in my household. They have truly transformed my breakfast routine! I've also experimented with various toppings and flavors, bringing in everything from seeds to spices, which adds a fun twist every time I make them.

Why You'll Love These Bagels
High in protein to keep you full longer
Deliciously creamy skyr adds a unique flavor twist
Perfect for breakfast, lunch, or a snack any time of day

The Importance of Skyr

Skyr is not only rich in protein, but it also contributes to the bagels' unique flavor and creamy texture. Unlike standard yogurt, skyr has a thicker consistency, which helps create a denser dough that still rises beautifully when baked. If you're unable to find skyr, Greek yogurt is an excellent substitute, offering similar thickness and taste. However, for the best results, choose full-fat varieties, as they provide richer flavor and moisture compared to non-fat options.

Incorporating skyr into the dough not only enhances the nutritional value, but it also keeps the bagels soft and fresh longer. Its tangy taste pairs beautifully with both sweet and savory toppings, making these bagels incredibly versatile. If you prefer a sweeter bagel, consider adding a touch of vanilla extract or cinnamon to the skyr for a delightful spin!

Perfecting Bagel Shape and Texture

Shaping the bagels correctly affects their final texture and appearance. Ensure that the dough balls are consistent in size for even baking. When creating the hole in the center, make sure it's large enough, as the bagel will puff up during boiling and baking. A good guideline is to use your thumb to make the hole, gradually widening it as you form the shape.

During the boiling step, monitor the bagels closely. This process helps to set the crust, allowing for that signature chewy texture. Boiling each side for exactly one minute is critical—overboiling can lead to a gummy interior, while undercooking may not allow the bagels to achieve their intended fluffiness. When done right, the exterior should look glossy and plump before you transfer them to the baking sheet.

Ingredients

Bagel Dough

2 cups all-purpose flour
1 cup skyr (or Greek yogurt)
1/2 cup warm water
1 tablespoon active dry yeast
1 tablespoon honey
1 teaspoon salt
1 tablespoon olive oil

Toppings (Optional)

Sesame seeds
Poppy seeds
Everything bagel seasoning

Mix all ingredients in a bowl until combined.

Instructions

Prepare the Dough

In a bowl, combine warm water, honey, and yeast. Let it sit for about 5 minutes until frothy. Add skyr, olive oil, flour, and salt, then mix until a dough forms.

Shape the Bagels

Once the dough comes together, knead for 5 minutes until smooth. Divide the dough into 4 equal pieces and shape each into a ball. Poke a hole in the center of each ball to form a bagel shape.

Proof the Bagels

Place the shaped bagels on a lightly floured surface. Cover them with a damp cloth and let them rest for 15 minutes.

Boil the Bagels

In a large pot, bring water to boil. Carefully add bagels, boiling for 1 minute on each side. Remove and place on a baking sheet lined with parchment paper.

Add Toppings and Bake

Sprinkle your choice of toppings on the bagels, then bake in a preheated oven at 375°F (190°C) for 20 minutes, or until golden brown.

Let the bagels cool slightly before serving.

Pro Tips

For extra flavor, try adding herbs or garlic powder to the dough mix! You can also use whole wheat flour for a healthier option.

Storage and Make-Ahead Tips

These protein bagels can be made ahead of time, stored in an airtight container for up to three days, or frozen for longer freshness. To freeze, wait for them to cool completely, then place them in a freezer-safe bag. When you're ready to enjoy, simply toast them from frozen or let them thaw at room temperature for about an hour.

If you find yourself making a large batch, consider varying the toppings for an exciting mix. Create a savory batch with everything bagel seasoning and a sweet batch sprinkled with cinnamon sugar, making snack or breakfast options more convenient and appealing as you reach for a quick meal during the week.

Customization Ideas

Feel free to customize your bagels by adding nutritional boosts to the dough. Chopped nuts, seeds, or even dried fruits can enhance both flavor and texture. A tablespoon of chia seeds or flaxseeds mixed into the dough can increase fiber content without compromising the bagels’ structure.

For a flavor twist, experiment with different cheeses as toppings. A sprinkle of parmesan or cheddar can add a savory note, while a drizzle of honey or a spread of fruit jam can transform your bagels into a sweet treat. The potential for variety is endless, so don’t hesitate to get creative with your bagel toppings to match your personal preferences.

Questions About Recipes

→ Can I make these bagels gluten-free?

Yes! You can use a gluten-free flour blend, but make sure it’s suitable for baking bread.

→ How can I store leftover bagels?

Store them in an airtight container in the fridge for up to 5 days, or freeze them for longer storage.

→ Can I use plain yogurt instead of skyr?

Absolutely! Plain Greek yogurt works as a great substitute for skyr.

→ What are some great toppings for these bagels?

Cream cheese, smoked salmon, or even avocado work wonderfully. Get creative!